Cluster: Rep_3065_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3065
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3065_c_0 | Rep_3065_c_0_844 | 907739 | 909133 | - | 3.A.2.1.5 |
| TC | Rep_3065_c_0 | Rep_3065_c_0_845 | 909309 | 910157 | - | 3.A.2.1.5 |
| TC | Rep_3065_c_0 | Rep_3065_c_0_846 | 910177 | 911697 | - | 3.A.2.1.5 |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_847 | 911882 | 912421 | - | OSCP |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_848 | 912418 | 912924 | - | ATP-synt_B |
| TC | Rep_3065_c_0 | Rep_3065_c_0_849 | 912969 | 913250 | - | 3.A.2.1.2 |
| TC | Rep_3065_c_0 | Rep_3065_c_0_850 | 913304 | 914047 | - | 3.A.2.1.5 |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_851 | 914051 | 914551 | - | ATP-synt_I |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_852 | 914572 | 914832 | - | ATPase_gene1 |
| CAZyme | Rep_3065_c_0 | Rep_3065_c_0_853 | 915195 | 916613 | - | GT5 |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_854 | 916760 | 917887 | - | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_855 | 917881 | 919074 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_3065_c_0 | Rep_3065_c_0_856 | 919147 | 921312 | - | CBM48 | GH13_9 |
Gene ID: Rep_3065_c_0_844
Type: TC
Location: 907739 - 909133 (-)
Type: TC
Location: 907739 - 909133 (-)
Gene ID: Rep_3065_c_0_845
Type: TC
Location: 909309 - 910157 (-)
Type: TC
Location: 909309 - 910157 (-)
Gene ID: Rep_3065_c_0_846
Type: TC
Location: 910177 - 911697 (-)
Type: TC
Location: 910177 - 911697 (-)
Gene ID: Rep_3065_c_0_847
Type: pfam
Location: 911882 - 912421 (-)
Type: pfam
Location: 911882 - 912421 (-)
Gene ID: Rep_3065_c_0_848
Type: pfam
Location: 912418 - 912924 (-)
Type: pfam
Location: 912418 - 912924 (-)
Gene ID: Rep_3065_c_0_849
Type: TC
Location: 912969 - 913250 (-)
Type: TC
Location: 912969 - 913250 (-)
Gene ID: Rep_3065_c_0_850
Type: TC
Location: 913304 - 914047 (-)
Type: TC
Location: 913304 - 914047 (-)
Gene ID: Rep_3065_c_0_851
Type: pfam
Location: 914051 - 914551 (-)
Type: pfam
Location: 914051 - 914551 (-)
Gene ID: Rep_3065_c_0_852
Type: pfam
Location: 914572 - 914832 (-)
Type: pfam
Location: 914572 - 914832 (-)
Gene ID: Rep_3065_c_0_853
Type: CAZyme
Location: 915195 - 916613 (-)
Type: CAZyme
Location: 915195 - 916613 (-)
Gene ID: Rep_3065_c_0_854
Type: pfam
Location: 916760 - 917887 (-)
Type: pfam
Location: 916760 - 917887 (-)
Gene ID: Rep_3065_c_0_855
Type: pfam
Location: 917881 - 919074 (-)
Type: pfam
Location: 917881 - 919074 (-)
Gene ID: Rep_3065_c_0_856
Type: CAZyme
Location: 919147 - 921312 (-)
Type: CAZyme
Location: 919147 - 921312 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.