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Cluster: Rep_3065_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3065_c_0 Rep_3065_c_0_650 711406 712251 + 3.A.1.3.27
TC Rep_3065_c_0 Rep_3065_c_0_651 712362 713126 + 3.A.1.3.20
TC Rep_3065_c_0 Rep_3065_c_0_652 713116 713880 + 3.A.1.3.25
NULL(UNKNOWN) Rep_3065_c_0 Rep_3065_c_0_653 714116 714760 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3065_c_0 Rep_3065_c_0_654 715083 715907 - 3.A.1.34.1
TC Rep_3065_c_0 Rep_3065_c_0_655 715909 716841 - 3.A.1.34.1
pfam Rep_3065_c_0 Rep_3065_c_0_656 717066 718163 - ABC_sub_bind | TAT_signal
NULL(UNKNOWN) Rep_3065_c_0 Rep_3065_c_0_657 718616 719449 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3065_c_0 Rep_3065_c_0_658 719443 720144 - 3.A.1.132.6
TF Rep_3065_c_0 Rep_3065_c_0_659 720137 720517 - GntR
CAZyme Rep_3065_c_0 Rep_3065_c_0_660 720666 721664 + GT2
Gene ID: Rep_3065_c_0_650
Type: TC
Location: 711406 - 712251 (+)
Gene ID: Rep_3065_c_0_651
Type: TC
Location: 712362 - 713126 (+)
Gene ID: Rep_3065_c_0_652
Type: TC
Location: 713116 - 713880 (+)
Gene ID: Rep_3065_c_0_653
Type:
Location: 714116 - 714760 (+)
Gene ID: Rep_3065_c_0_654
Type: TC
Location: 715083 - 715907 (-)
Gene ID: Rep_3065_c_0_655
Type: TC
Location: 715909 - 716841 (-)
Gene ID: Rep_3065_c_0_656
Type: pfam
Location: 717066 - 718163 (-)
Gene ID: Rep_3065_c_0_657
Type:
Location: 718616 - 719449 (-)
Gene ID: Rep_3065_c_0_658
Type: TC
Location: 719443 - 720144 (-)
Gene ID: Rep_3065_c_0_659
Type: TF
Location: 720137 - 720517 (-)
Gene ID: Rep_3065_c_0_660
Type: CAZyme
Location: 720666 - 721664 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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