dbCAN Logo

Cluster: Rep_3065_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3065_c_0 Rep_3065_c_0_254 286780 289176 + GT35
CAZyme Rep_3065_c_0 Rep_3065_c_0_255 289247 291103 + GH13_39
pfam Rep_3065_c_0 Rep_3065_c_0_256 291373 291831 + NfeD
TC Rep_3065_c_0 Rep_3065_c_0_257 291850 292758 + 8.A.21.2.2
pfam Rep_3065_c_0 Rep_3065_c_0_258 292771 293241 + DUF386
TF Rep_3065_c_0 Rep_3065_c_0_259 293494 294639 + HTH_3
TC Rep_3065_c_0 Rep_3065_c_0_260 294689 296068 - 1.A.26.1.3
pfam Rep_3065_c_0 Rep_3065_c_0_261 296420 297859 - tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC Rep_3065_c_0 Rep_3065_c_0_262 297989 298222 - 3.D.1.6.3
Gene ID: Rep_3065_c_0_254
Type: CAZyme
Location: 286780 - 289176 (+)
Gene ID: Rep_3065_c_0_255
Type: CAZyme
Location: 289247 - 291103 (+)
Gene ID: Rep_3065_c_0_256
Type: pfam
Location: 291373 - 291831 (+)
Gene ID: Rep_3065_c_0_257
Type: TC
Location: 291850 - 292758 (+)
Gene ID: Rep_3065_c_0_258
Type: pfam
Location: 292771 - 293241 (+)
Gene ID: Rep_3065_c_0_259
Type: TF
Location: 293494 - 294639 (+)
Gene ID: Rep_3065_c_0_260
Type: TC
Location: 294689 - 296068 (-)
Gene ID: Rep_3065_c_0_261
Type: pfam
Location: 296420 - 297859 (-)
Gene ID: Rep_3065_c_0_262
Type: TC
Location: 297989 - 298222 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List