Cluster: Rep_3065_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3065
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3065_c_0 | Rep_3065_c_0_2687 | 2877199 | 2879775 | + | 3.A.3.5.15 |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_2688 | 2880028 | 2881362 | - | tRNA-synt_2 | tRNA_anti-codon |
| TC | Rep_3065_c_0 | Rep_3065_c_0_2689 | 2881438 | 2882049 | - | 9.B.18.1.1 |
| CAZyme | Rep_3065_c_0 | Rep_3065_c_0_2690 | 2882240 | 2884249 | + | GH31_1 |
Gene ID: Rep_3065_c_0_2687
Type: TC
Location: 2877199 - 2879775 (+)
Type: TC
Location: 2877199 - 2879775 (+)
Gene ID: Rep_3065_c_0_2688
Type: pfam
Location: 2880028 - 2881362 (-)
Type: pfam
Location: 2880028 - 2881362 (-)
Gene ID: Rep_3065_c_0_2689
Type: TC
Location: 2881438 - 2882049 (-)
Type: TC
Location: 2881438 - 2882049 (-)
Gene ID: Rep_3065_c_0_2690
Type: CAZyme
Location: 2882240 - 2884249 (+)
Type: CAZyme
Location: 2882240 - 2884249 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.