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Cluster: Rep_3065_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3065_c_0 Rep_3065_c_0_1662 1781041 1782639 - GT4
NULL(UNKNOWN) Rep_3065_c_0 Rep_3065_c_0_1663 1782665 1783486 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_3065_c_0 Rep_3065_c_0_1664 1783600 1784733 - Acyl_transf_3
TC Rep_3065_c_0 Rep_3065_c_0_1665 1785173 1786654 + 4.C.1.1.6
TC Rep_3065_c_0 Rep_3065_c_0_1666 1786793 1788265 + 4.C.1.1.6
pfam Rep_3065_c_0 Rep_3065_c_0_1667 1788346 1788591 + PP-binding
NULL(UNKNOWN) Rep_3065_c_0 Rep_3065_c_0_1668 1788595 1789800 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3065_c_0 Rep_3065_c_0_1669 1789975 1791366 + 2.A.23.1.5
Gene ID: Rep_3065_c_0_1662
Type: CAZyme
Location: 1781041 - 1782639 (-)
Gene ID: Rep_3065_c_0_1663
Type:
Location: 1782665 - 1783486 (-)
Gene ID: Rep_3065_c_0_1664
Type: pfam
Location: 1783600 - 1784733 (-)
Gene ID: Rep_3065_c_0_1665
Type: TC
Location: 1785173 - 1786654 (+)
Gene ID: Rep_3065_c_0_1666
Type: TC
Location: 1786793 - 1788265 (+)
Gene ID: Rep_3065_c_0_1667
Type: pfam
Location: 1788346 - 1788591 (+)
Gene ID: Rep_3065_c_0_1668
Type:
Location: 1788595 - 1789800 (+)
Gene ID: Rep_3065_c_0_1669
Type: TC
Location: 1789975 - 1791366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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