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Cluster: Rep_3065_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3065_c_0 Rep_3065_c_0_1505 1607138 1607947 + 3.A.1.103.6
TC Rep_3065_c_0 Rep_3065_c_0_1506 1607964 1608707 + 3.A.1.103.1
CAZyme Rep_3065_c_0 Rep_3065_c_0_1507 1608717 1610597 + GT2
pfam Rep_3065_c_0 Rep_3065_c_0_1508 1610594 1611130 + DUF5662
NULL(UNKNOWN) Rep_3065_c_0 Rep_3065_c_0_1509 1611269 1611391 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3065_c_0 Rep_3065_c_0_1510 1611721 1613043 + 3.D.6.1.2
TC Rep_3065_c_0 Rep_3065_c_0_1511 1613043 1613996 + 3.D.6.1.2
pfam Rep_3065_c_0 Rep_3065_c_0_1512 1613993 1614541 + FMN_bind
TC Rep_3065_c_0 Rep_3065_c_0_1513 1614558 1615220 + 3.D.6.1.2
TC Rep_3065_c_0 Rep_3065_c_0_1514 1615225 1615857 + 3.D.6.1.2
TC Rep_3065_c_0 Rep_3065_c_0_1515 1615873 1616769 + 3.D.6.1.3
TC Rep_3065_c_0 Rep_3065_c_0_1516 1617338 1618468 + 2.A.1.15.18
Gene ID: Rep_3065_c_0_1505
Type: TC
Location: 1607138 - 1607947 (+)
Gene ID: Rep_3065_c_0_1506
Type: TC
Location: 1607964 - 1608707 (+)
Gene ID: Rep_3065_c_0_1507
Type: CAZyme
Location: 1608717 - 1610597 (+)
Gene ID: Rep_3065_c_0_1508
Type: pfam
Location: 1610594 - 1611130 (+)
Gene ID: Rep_3065_c_0_1509
Type:
Location: 1611269 - 1611391 (-)
Gene ID: Rep_3065_c_0_1510
Type: TC
Location: 1611721 - 1613043 (+)
Gene ID: Rep_3065_c_0_1511
Type: TC
Location: 1613043 - 1613996 (+)
Gene ID: Rep_3065_c_0_1512
Type: pfam
Location: 1613993 - 1614541 (+)
Gene ID: Rep_3065_c_0_1513
Type: TC
Location: 1614558 - 1615220 (+)
Gene ID: Rep_3065_c_0_1514
Type: TC
Location: 1615225 - 1615857 (+)
Gene ID: Rep_3065_c_0_1515
Type: TC
Location: 1615873 - 1616769 (+)
Gene ID: Rep_3065_c_0_1516
Type: TC
Location: 1617338 - 1618468 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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