Cluster: Rep_3065_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3065
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3065_c_0 | Rep_3065_c_0_929 | 1003491 | 1005263 | - | GH2 |
| STP | Rep_3065_c_0 | Rep_3065_c_0_930 | 1005329 | 1006528 | - | Aminotran_1_2 |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_931 | 1006548 | 1007741 | - | Cation_efflux | ZT_dimer |
| TC | Rep_3065_c_0 | Rep_3065_c_0_932 | 1007891 | 1009531 | - | 8.A.7.1.1 |
Gene ID: Rep_3065_c_0_929
Type: CAZyme
Location: 1003491 - 1005263 (-)
Type: CAZyme
Location: 1003491 - 1005263 (-)
Gene ID: Rep_3065_c_0_930
Type: STP
Location: 1005329 - 1006528 (-)
Type: STP
Location: 1005329 - 1006528 (-)
Gene ID: Rep_3065_c_0_931
Type: pfam
Location: 1006548 - 1007741 (-)
Type: pfam
Location: 1006548 - 1007741 (-)
Gene ID: Rep_3065_c_0_932
Type: TC
Location: 1007891 - 1009531 (-)
Type: TC
Location: 1007891 - 1009531 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.