Cluster: Rep_3060_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3060_c_8 | Rep_3060_c_8_22 | 22322 | 23809 | - | GH29 |
| pfam | Rep_3060_c_8 | Rep_3060_c_8_23 | 23850 | 24206 | - | Hpt |
| TC | Rep_3060_c_8 | Rep_3060_c_8_24 | 24226 | 25314 | - | 8.A.59.4.2 |
| pfam | Rep_3060_c_8 | Rep_3060_c_8_25 | 25338 | 27320 | - | FBPase_2 |
| TC | Rep_3060_c_8 | Rep_3060_c_8_26 | 27409 | 28785 | - | 2.A.66.1.45 |
Gene ID: Rep_3060_c_8_22
Type: CAZyme
Location: 22322 - 23809 (-)
Type: CAZyme
Location: 22322 - 23809 (-)
Gene ID: Rep_3060_c_8_23
Type: pfam
Location: 23850 - 24206 (-)
Type: pfam
Location: 23850 - 24206 (-)
Gene ID: Rep_3060_c_8_24
Type: TC
Location: 24226 - 25314 (-)
Type: TC
Location: 24226 - 25314 (-)
Gene ID: Rep_3060_c_8_25
Type: pfam
Location: 25338 - 27320 (-)
Type: pfam
Location: 25338 - 27320 (-)
Gene ID: Rep_3060_c_8_26
Type: TC
Location: 27409 - 28785 (-)
Type: TC
Location: 27409 - 28785 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.