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Cluster: Rep_3060_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3060_c_1 Rep_3060_c_1_61 66461 67852 - 2.A.66.1.26
TC Rep_3060_c_1 Rep_3060_c_1_62 68051 69436 + 2.A.66.1.13
TC Rep_3060_c_1 Rep_3060_c_1_63 69529 70353 - 3.A.1.132.3
pfam Rep_3060_c_1 Rep_3060_c_1_64 70509 71330 - PNP_UDP_1
TC Rep_3060_c_1 Rep_3060_c_1_65 71603 73111 + 2.A.66.2.14
CAZyme Rep_3060_c_1 Rep_3060_c_1_66 73187 74758 - GH77
TC Rep_3060_c_1 Rep_3060_c_1_67 74823 76592 - 3.A.1.106.2
Gene ID: Rep_3060_c_1_61
Type: TC
Location: 66461 - 67852 (-)
Gene ID: Rep_3060_c_1_62
Type: TC
Location: 68051 - 69436 (+)
Gene ID: Rep_3060_c_1_63
Type: TC
Location: 69529 - 70353 (-)
Gene ID: Rep_3060_c_1_64
Type: pfam
Location: 70509 - 71330 (-)
Gene ID: Rep_3060_c_1_65
Type: TC
Location: 71603 - 73111 (+)
Gene ID: Rep_3060_c_1_66
Type: CAZyme
Location: 73187 - 74758 (-)
Gene ID: Rep_3060_c_1_67
Type: TC
Location: 74823 - 76592 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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