Cluster: Rep_3060_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3060_c_77 | Rep_3060_c_77_2 | 865 | 1767 | - | 8.A.21.2.2 |
| pfam | Rep_3060_c_77 | Rep_3060_c_77_3 | 1816 | 2262 | - | NfeD |
| CAZyme | Rep_3060_c_77 | Rep_3060_c_77_4 | 2441 | 4291 | - | GH13_39 |
| CAZyme | Rep_3060_c_77 | Rep_3060_c_77_5 | 4407 | 6812 | - | GT35 |
Gene ID: Rep_3060_c_77_2
Type: TC
Location: 865 - 1767 (-)
Type: TC
Location: 865 - 1767 (-)
Gene ID: Rep_3060_c_77_3
Type: pfam
Location: 1816 - 2262 (-)
Type: pfam
Location: 1816 - 2262 (-)
Gene ID: Rep_3060_c_77_4
Type: CAZyme
Location: 2441 - 4291 (-)
Type: CAZyme
Location: 2441 - 4291 (-)
Gene ID: Rep_3060_c_77_5
Type: CAZyme
Location: 4407 - 6812 (-)
Type: CAZyme
Location: 4407 - 6812 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.