Cluster: Rep_3060_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3060_c_70 | Rep_3060_c_70_2 | 1042 | 2448 | + | 9.B.18.1.1 |
| CAZyme | Rep_3060_c_70 | Rep_3060_c_70_3 | 2485 | 3648 | + | GT4 |
| CAZyme | Rep_3060_c_70 | Rep_3060_c_70_4 | 3645 | 4697 | + | GT4 |
| CAZyme | Rep_3060_c_70 | Rep_3060_c_70_5 | 4739 | 5680 | + | GT2 |
Gene ID: Rep_3060_c_70_2
Type: TC
Location: 1042 - 2448 (+)
Type: TC
Location: 1042 - 2448 (+)
Gene ID: Rep_3060_c_70_3
Type: CAZyme
Location: 2485 - 3648 (+)
Type: CAZyme
Location: 2485 - 3648 (+)
Gene ID: Rep_3060_c_70_4
Type: CAZyme
Location: 3645 - 4697 (+)
Type: CAZyme
Location: 3645 - 4697 (+)
Gene ID: Rep_3060_c_70_5
Type: CAZyme
Location: 4739 - 5680 (+)
Type: CAZyme
Location: 4739 - 5680 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.