Cluster: Rep_3060_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3060
- CGC Family ID: CGCFAM_08261
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3060_c_61 | Rep_3060_c_61_9 | 7841 | 9307 | + | GH51_1 |
| peptidase | Rep_3060_c_61 | Rep_3060_c_61_10 | 9383 | 9940 | - | C56.UNW |
| TC | Rep_3060_c_61 | Rep_3060_c_61_11 | 10075 | 10791 | - | 3.A.1.3.25 |
| TC | Rep_3060_c_61 | Rep_3060_c_61_12 | 10778 | 11551 | - | 3.A.1.3.20 |
Gene ID: Rep_3060_c_61_9
Type: CAZyme
Location: 7841 - 9307 (+)
Type: CAZyme
Location: 7841 - 9307 (+)
Gene ID: Rep_3060_c_61_10
Type: peptidase
Location: 9383 - 9940 (-)
Type: peptidase
Location: 9383 - 9940 (-)
Gene ID: Rep_3060_c_61_11
Type: TC
Location: 10075 - 10791 (-)
Type: TC
Location: 10075 - 10791 (-)
Gene ID: Rep_3060_c_61_12
Type: TC
Location: 10778 - 11551 (-)
Type: TC
Location: 10778 - 11551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.