Cluster: Rep_3060_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3060
- CGC Family ID: CGCFAM_08913
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3060_c_1 | Rep_3060_c_1_51 | 56031 | 57365 | + | 2.A.66.1.7 |
| pfam | Rep_3060_c_1 | Rep_3060_c_1_52 | 57728 | 58429 | + | VTT_dom |
| CAZyme | Rep_3060_c_1 | Rep_3060_c_1_53 | 58436 | 59380 | - | GH25 |
Gene ID: Rep_3060_c_1_51
Type: TC
Location: 56031 - 57365 (+)
Type: TC
Location: 56031 - 57365 (+)
Gene ID: Rep_3060_c_1_52
Type: pfam
Location: 57728 - 58429 (+)
Type: pfam
Location: 57728 - 58429 (+)
Gene ID: Rep_3060_c_1_53
Type: CAZyme
Location: 58436 - 59380 (-)
Type: CAZyme
Location: 58436 - 59380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.