Cluster: Rep_3060_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3060_c_46 | Rep_3060_c_46_8 | 5384 | 7309 | - | 3.A.2.3.3 |
| pfam | Rep_3060_c_46 | Rep_3060_c_46_9 | 7310 | 8398 | - | vATP-synt_AC39 |
| NULL(UNKNOWN) | Rep_3060_c_46 | Rep_3060_c_46_10 | 8398 | 8739 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3060_c_46 | Rep_3060_c_46_11 | 9020 | 10969 | - | GH13_14 |
Gene ID: Rep_3060_c_46_8
Type: TC
Location: 5384 - 7309 (-)
Type: TC
Location: 5384 - 7309 (-)
Gene ID: Rep_3060_c_46_9
Type: pfam
Location: 7310 - 8398 (-)
Type: pfam
Location: 7310 - 8398 (-)
Gene ID: Rep_3060_c_46_10
Type:
Location: 8398 - 8739 (-)
Type:
Location: 8398 - 8739 (-)
Gene ID: Rep_3060_c_46_11
Type: CAZyme
Location: 9020 - 10969 (-)
Type: CAZyme
Location: 9020 - 10969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.