Cluster: Rep_3060_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3060
- CGC Family ID: CGCFAM_00470
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3060_c_28 | Rep_3060_c_28_1 | 339 | 1250 | + | 2.A.115.1.5 |
| peptidase | Rep_3060_c_28 | Rep_3060_c_28_2 | 1461 | 2858 | - | M18.UPW |
| CAZyme | Rep_3060_c_28 | Rep_3060_c_28_3 | 2926 | 3525 | - | GH23 |
Gene ID: Rep_3060_c_28_1
Type: TC
Location: 339 - 1250 (+)
Type: TC
Location: 339 - 1250 (+)
Gene ID: Rep_3060_c_28_2
Type: peptidase
Location: 1461 - 2858 (-)
Type: peptidase
Location: 1461 - 2858 (-)
Gene ID: Rep_3060_c_28_3
Type: CAZyme
Location: 2926 - 3525 (-)
Type: CAZyme
Location: 2926 - 3525 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.