Cluster: Rep_3060_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3060_c_26 | Rep_3060_c_26_12 | 11095 | 12321 | + | GT4 |
| CAZyme | Rep_3060_c_26 | Rep_3060_c_26_13 | 12367 | 13107 | + | GT2 |
| pfam | Rep_3060_c_26 | Rep_3060_c_26_14 | 13104 | 13481 | + | DUF2304 |
| TC | Rep_3060_c_26 | Rep_3060_c_26_15 | 13522 | 14973 | + | 2.A.50.2.1 |
Gene ID: Rep_3060_c_26_12
Type: CAZyme
Location: 11095 - 12321 (+)
Type: CAZyme
Location: 11095 - 12321 (+)
Gene ID: Rep_3060_c_26_13
Type: CAZyme
Location: 12367 - 13107 (+)
Type: CAZyme
Location: 12367 - 13107 (+)
Gene ID: Rep_3060_c_26_14
Type: pfam
Location: 13104 - 13481 (+)
Type: pfam
Location: 13104 - 13481 (+)
Gene ID: Rep_3060_c_26_15
Type: TC
Location: 13522 - 14973 (+)
Type: TC
Location: 13522 - 14973 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.