Cluster: Rep_304_CGC44
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_304
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_304_c_102 | Rep_304_c_102_18 | 21719 | 24016 | - | GH3 |
| CAZyme | Rep_304_c_102 | Rep_304_c_102_19 | 24061 | 28023 | - | GH127 | GH3 |
| pfam | Rep_304_c_102 | Rep_304_c_102_20 | 28151 | 29428 | - | SusF_SusE |
| CAZyme | Rep_304_c_102 | Rep_304_c_102_21 | 29479 | 30891 | - | GH27 |
| pfam | Rep_304_c_102 | Rep_304_c_102_22 | 30909 | 32840 | - | SusF_SusE | SusF_SusE |
| TC | Rep_304_c_102 | Rep_304_c_102_23 | 32859 | 34580 | - | 8.A.46.1.1 |
| TC | Rep_304_c_102 | Rep_304_c_102_24 | 34610 | 37900 | - | 1.B.14.6.1 |
Gene ID: Rep_304_c_102_18
Type: CAZyme
Location: 21719 - 24016 (-)
Type: CAZyme
Location: 21719 - 24016 (-)
Gene ID: Rep_304_c_102_19
Type: CAZyme
Location: 24061 - 28023 (-)
Type: CAZyme
Location: 24061 - 28023 (-)
Gene ID: Rep_304_c_102_20
Type: pfam
Location: 28151 - 29428 (-)
Type: pfam
Location: 28151 - 29428 (-)
Gene ID: Rep_304_c_102_21
Type: CAZyme
Location: 29479 - 30891 (-)
Type: CAZyme
Location: 29479 - 30891 (-)
Gene ID: Rep_304_c_102_22
Type: pfam
Location: 30909 - 32840 (-)
Type: pfam
Location: 30909 - 32840 (-)
Gene ID: Rep_304_c_102_23
Type: TC
Location: 32859 - 34580 (-)
Type: TC
Location: 32859 - 34580 (-)
Gene ID: Rep_304_c_102_24
Type: TC
Location: 34610 - 37900 (-)
Type: TC
Location: 34610 - 37900 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.