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Cluster: Rep_304_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_304_c_95 Rep_304_c_95_6 7139 10510 + 1.B.14.6.1
pfam Rep_304_c_95 Rep_304_c_95_7 10517 12223 + SusD_RagB | SusD-like_3
CAZyme Rep_304_c_95 Rep_304_c_95_8 12297 13811 + GH30
NULL(UNKNOWN) Rep_304_c_95 Rep_304_c_95_9 13839 16307 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_304_c_95 Rep_304_c_95_10 16394 16918 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_304_c_95 Rep_304_c_95_11 16929 19136 + GH36
CAZyme Rep_304_c_95 Rep_304_c_95_12 19143 22172 + GH97
NULL(UNKNOWN) Rep_304_c_95 Rep_304_c_95_13 22157 22801 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_304_c_95 Rep_304_c_95_14 22970 24637 - 4.C.1.1.4
Gene ID: Rep_304_c_95_6
Type: TC
Location: 7139 - 10510 (+)
Gene ID: Rep_304_c_95_7
Type: pfam
Location: 10517 - 12223 (+)
Gene ID: Rep_304_c_95_8
Type: CAZyme
Location: 12297 - 13811 (+)
Gene ID: Rep_304_c_95_9
Type:
Location: 13839 - 16307 (+)
Gene ID: Rep_304_c_95_10
Type:
Location: 16394 - 16918 (+)
Gene ID: Rep_304_c_95_11
Type: CAZyme
Location: 16929 - 19136 (+)
Gene ID: Rep_304_c_95_12
Type: CAZyme
Location: 19143 - 22172 (+)
Gene ID: Rep_304_c_95_13
Type:
Location: 22157 - 22801 (-)
Gene ID: Rep_304_c_95_14
Type: TC
Location: 22970 - 24637 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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