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Cluster: Rep_304_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_304_c_91 Rep_304_c_91_5 4239 5084 - 3.A.1.132.12
pfam Rep_304_c_91 Rep_304_c_91_6 5257 6894 - Cpn60_TCP1
pfam Rep_304_c_91 Rep_304_c_91_7 6966 7238 - Cpn10
CAZyme Rep_304_c_91 Rep_304_c_91_8 7421 8887 - GH13_28
TC Rep_304_c_91 Rep_304_c_91_9 9049 9753 + 3.A.25.1.1
pfam Rep_304_c_91 Rep_304_c_91_10 9765 10526 + DHODB_Fe-S_bind
STP Rep_304_c_91 Rep_304_c_91_11 10523 12031 + Pyr_redox_2
TC Rep_304_c_91 Rep_304_c_91_12 12054 13067 - 1.A.23.2.1
pfam Rep_304_c_91 Rep_304_c_91_13 13138 14595 - TRAM | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
pfam Rep_304_c_91 Rep_304_c_91_14 14737 15435 + Vut_1
TC Rep_304_c_91 Rep_304_c_91_15 15467 17368 - 3.A.24.1.1
Gene ID: Rep_304_c_91_5
Type: TC
Location: 4239 - 5084 (-)
Gene ID: Rep_304_c_91_6
Type: pfam
Location: 5257 - 6894 (-)
Gene ID: Rep_304_c_91_7
Type: pfam
Location: 6966 - 7238 (-)
Gene ID: Rep_304_c_91_8
Type: CAZyme
Location: 7421 - 8887 (-)
Gene ID: Rep_304_c_91_9
Type: TC
Location: 9049 - 9753 (+)
Gene ID: Rep_304_c_91_10
Type: pfam
Location: 9765 - 10526 (+)
Gene ID: Rep_304_c_91_11
Type: STP
Location: 10523 - 12031 (+)
Gene ID: Rep_304_c_91_12
Type: TC
Location: 12054 - 13067 (-)
Gene ID: Rep_304_c_91_13
Type: pfam
Location: 13138 - 14595 (-)
Gene ID: Rep_304_c_91_14
Type: pfam
Location: 14737 - 15435 (+)
Gene ID: Rep_304_c_91_15
Type: TC
Location: 15467 - 17368 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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