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Cluster: Rep_304_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_304_c_85 Rep_304_c_85_14 19831 22308 - GH2
CAZyme Rep_304_c_85 Rep_304_c_85_15 22387 25269 - GH31_4
TF Rep_304_c_85 Rep_304_c_85_16 25521 29525 - HTH_AraC | HTH_AraC
TC Rep_304_c_85 Rep_304_c_85_17 29957 33124 + 1.B.14.6.1
TC Rep_304_c_85 Rep_304_c_85_18 33202 34869 + 8.A.46.1.2
NULL(UNKNOWN) Rep_304_c_85 Rep_304_c_85_19 34946 36715 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_304_c_85 Rep_304_c_85_20 36729 38855 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_304_c_85 Rep_304_c_85_21 38881 40611 + GH5_4
pfam Rep_304_c_85 Rep_304_c_85_22 40799 42280 + FGGY_N | FGGY_C
pfam Rep_304_c_85 Rep_304_c_85_23 42302 43621 + AP_endonuc_2
TC Rep_304_c_85 Rep_304_c_85_24 43724 45196 + 2.A.1.1.3
Gene ID: Rep_304_c_85_14
Type: CAZyme
Location: 19831 - 22308 (-)
Gene ID: Rep_304_c_85_15
Type: CAZyme
Location: 22387 - 25269 (-)
Gene ID: Rep_304_c_85_16
Type: TF
Location: 25521 - 29525 (-)
Gene ID: Rep_304_c_85_17
Type: TC
Location: 29957 - 33124 (+)
Gene ID: Rep_304_c_85_18
Type: TC
Location: 33202 - 34869 (+)
Gene ID: Rep_304_c_85_19
Type:
Location: 34946 - 36715 (+)
Gene ID: Rep_304_c_85_20
Type:
Location: 36729 - 38855 (+)
Gene ID: Rep_304_c_85_21
Type: CAZyme
Location: 38881 - 40611 (+)
Gene ID: Rep_304_c_85_22
Type: pfam
Location: 40799 - 42280 (+)
Gene ID: Rep_304_c_85_23
Type: pfam
Location: 42302 - 43621 (+)
Gene ID: Rep_304_c_85_24
Type: TC
Location: 43724 - 45196 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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