Cluster: Rep_304_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_304
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_304_c_75 | Rep_304_c_75_8 | 12397 | 15597 | - | 1.B.14.6.1 |
| TF | Rep_304_c_75 | Rep_304_c_75_9 | 15662 | 16222 | - | HTH_5 |
| TF | Rep_304_c_75 | Rep_304_c_75_10 | 16392 | 19205 | - | HTH_AraC |
| CAZyme | Rep_304_c_75 | Rep_304_c_75_11 | 19889 | 21739 | - | GH128 |
| TC | Rep_304_c_75 | Rep_304_c_75_12 | 21840 | 23762 | - | 1.B.14.3.1 |
Gene ID: Rep_304_c_75_8
Type: TC
Location: 12397 - 15597 (-)
Type: TC
Location: 12397 - 15597 (-)
Gene ID: Rep_304_c_75_9
Type: TF
Location: 15662 - 16222 (-)
Type: TF
Location: 15662 - 16222 (-)
Gene ID: Rep_304_c_75_10
Type: TF
Location: 16392 - 19205 (-)
Type: TF
Location: 16392 - 19205 (-)
Gene ID: Rep_304_c_75_11
Type: CAZyme
Location: 19889 - 21739 (-)
Type: CAZyme
Location: 19889 - 21739 (-)
Gene ID: Rep_304_c_75_12
Type: TC
Location: 21840 - 23762 (-)
Type: TC
Location: 21840 - 23762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.