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Cluster: Rep_304_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_304_c_74 Rep_304_c_74_9 10292 11752 - 4.C.1.1.6
TC Rep_304_c_74 Rep_304_c_74_10 11898 13307 + 2.A.66.1.25
CAZyme Rep_304_c_74 Rep_304_c_74_11 13405 14412 + GH5_2
pfam Rep_304_c_74 Rep_304_c_74_12 14409 14888 + LuxS
NULL(UNKNOWN) Rep_304_c_74 Rep_304_c_74_13 15082 15744 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_304_c_74 Rep_304_c_74_14 15897 17264 - CE20
pfam Rep_304_c_74 Rep_304_c_74_15 17437 18528 + Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme Rep_304_c_74 Rep_304_c_74_16 18711 20252 - GH51_1
Gene ID: Rep_304_c_74_9
Type: TC
Location: 10292 - 11752 (-)
Gene ID: Rep_304_c_74_10
Type: TC
Location: 11898 - 13307 (+)
Gene ID: Rep_304_c_74_11
Type: CAZyme
Location: 13405 - 14412 (+)
Gene ID: Rep_304_c_74_12
Type: pfam
Location: 14409 - 14888 (+)
Gene ID: Rep_304_c_74_13
Type:
Location: 15082 - 15744 (+)
Gene ID: Rep_304_c_74_14
Type: CAZyme
Location: 15897 - 17264 (-)
Gene ID: Rep_304_c_74_15
Type: pfam
Location: 17437 - 18528 (+)
Gene ID: Rep_304_c_74_16
Type: CAZyme
Location: 18711 - 20252 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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