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Cluster: Rep_304_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_304_c_62 Rep_304_c_62_4 2318 3214 - 3.A.1.115.1
pfam Rep_304_c_62 Rep_304_c_62_5 3594 5345 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam Rep_304_c_62 Rep_304_c_62_6 5373 5969 + Flavin_Reduct
CAZyme Rep_304_c_62 Rep_304_c_62_7 6189 8669 + GT51
TC Rep_304_c_62 Rep_304_c_62_8 8749 11157 + 3.B.1.1.6
pfam Rep_304_c_62 Rep_304_c_62_9 11392 11646 + Ribosomal_L31
pfam Rep_304_c_62 Rep_304_c_62_10 11928 12482 + Pep_deformylase
TC Rep_304_c_62 Rep_304_c_62_11 12521 14176 + 3.A.1.120.6
TC Rep_304_c_62 Rep_304_c_62_12 14218 15909 + 2.A.81.1.2
Gene ID: Rep_304_c_62_4
Type: TC
Location: 2318 - 3214 (-)
Gene ID: Rep_304_c_62_5
Type: pfam
Location: 3594 - 5345 (+)
Gene ID: Rep_304_c_62_6
Type: pfam
Location: 5373 - 5969 (+)
Gene ID: Rep_304_c_62_7
Type: CAZyme
Location: 6189 - 8669 (+)
Gene ID: Rep_304_c_62_8
Type: TC
Location: 8749 - 11157 (+)
Gene ID: Rep_304_c_62_9
Type: pfam
Location: 11392 - 11646 (+)
Gene ID: Rep_304_c_62_10
Type: pfam
Location: 11928 - 12482 (+)
Gene ID: Rep_304_c_62_11
Type: TC
Location: 12521 - 14176 (+)
Gene ID: Rep_304_c_62_12
Type: TC
Location: 14218 - 15909 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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