Cluster: Rep_304_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_304
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_304_c_56 | Rep_304_c_56_24 | 26809 | 27630 | - | GT5 |
| pfam | Rep_304_c_56 | Rep_304_c_56_25 | 27793 | 28656 | + | Pantoate_ligase |
| pfam | Rep_304_c_56 | Rep_304_c_56_26 | 28687 | 29037 | + | Asp_decarbox |
| TC | Rep_304_c_56 | Rep_304_c_56_27 | 29115 | 30461 | + | 3.A.5.1.1 |
| TC | Rep_304_c_56 | Rep_304_c_56_28 | 30458 | 32071 | + | 3.A.1.121.4 |
| pfam | Rep_304_c_56 | Rep_304_c_56_29 | 32536 | 32826 | + | Dabb |
| NULL(UNKNOWN) | Rep_304_c_56 | Rep_304_c_56_30 | 32882 | 34123 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_304_c_56 | Rep_304_c_56_31 | 34161 | 35969 | - | 3.A.1.120.6 |
Gene ID: Rep_304_c_56_24
Type: CAZyme
Location: 26809 - 27630 (-)
Type: CAZyme
Location: 26809 - 27630 (-)
Gene ID: Rep_304_c_56_25
Type: pfam
Location: 27793 - 28656 (+)
Type: pfam
Location: 27793 - 28656 (+)
Gene ID: Rep_304_c_56_26
Type: pfam
Location: 28687 - 29037 (+)
Type: pfam
Location: 28687 - 29037 (+)
Gene ID: Rep_304_c_56_27
Type: TC
Location: 29115 - 30461 (+)
Type: TC
Location: 29115 - 30461 (+)
Gene ID: Rep_304_c_56_28
Type: TC
Location: 30458 - 32071 (+)
Type: TC
Location: 30458 - 32071 (+)
Gene ID: Rep_304_c_56_29
Type: pfam
Location: 32536 - 32826 (+)
Type: pfam
Location: 32536 - 32826 (+)
Gene ID: Rep_304_c_56_30
Type:
Location: 32882 - 34123 (+)
Type:
Location: 32882 - 34123 (+)
Gene ID: Rep_304_c_56_31
Type: TC
Location: 34161 - 35969 (-)
Type: TC
Location: 34161 - 35969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.