Cluster: Rep_304_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_304
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_304_c_7 | Rep_304_c_7_10 | 7022 | 8302 | + | 9.A.40.2.2 |
| STP | Rep_304_c_7 | Rep_304_c_7_11 | 8517 | 9023 | + | Sigma70_r2 | Sigma70_r4_2 |
| TC | Rep_304_c_7 | Rep_304_c_7_12 | 9255 | 10499 | + | 2.A.1.2.97 |
| NULL(UNKNOWN) | Rep_304_c_7 | Rep_304_c_7_13 | 10877 | 11818 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_304_c_7 | Rep_304_c_7_14 | 12124 | 13968 | + | 3.A.1.106.1 |
| CAZyme | Rep_304_c_7 | Rep_304_c_7_15 | 14188 | 15402 | + | GH26 |
| CAZyme | Rep_304_c_7 | Rep_304_c_7_16 | 15449 | 16618 | + | GH130_1 |
| TC | Rep_304_c_7 | Rep_304_c_7_17 | 16684 | 18138 | + | 2.A.2.3.4 |
Gene ID: Rep_304_c_7_10
Type: TC
Location: 7022 - 8302 (+)
Type: TC
Location: 7022 - 8302 (+)
Gene ID: Rep_304_c_7_11
Type: STP
Location: 8517 - 9023 (+)
Type: STP
Location: 8517 - 9023 (+)
Gene ID: Rep_304_c_7_12
Type: TC
Location: 9255 - 10499 (+)
Type: TC
Location: 9255 - 10499 (+)
Gene ID: Rep_304_c_7_13
Type:
Location: 10877 - 11818 (+)
Type:
Location: 10877 - 11818 (+)
Gene ID: Rep_304_c_7_14
Type: TC
Location: 12124 - 13968 (+)
Type: TC
Location: 12124 - 13968 (+)
Gene ID: Rep_304_c_7_15
Type: CAZyme
Location: 14188 - 15402 (+)
Type: CAZyme
Location: 14188 - 15402 (+)
Gene ID: Rep_304_c_7_16
Type: CAZyme
Location: 15449 - 16618 (+)
Type: CAZyme
Location: 15449 - 16618 (+)
Gene ID: Rep_304_c_7_17
Type: TC
Location: 16684 - 18138 (+)
Type: TC
Location: 16684 - 18138 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.