Cluster: Rep_304_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_304
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_304_c_55 | Rep_304_c_55_47 | 34985 | 37423 | + | GH94 |
| pfam | Rep_304_c_55 | Rep_304_c_55_48 | 37508 | 39820 | - | TonB_dep_Rec_b-barrel | CarbopepD_reg_2 | OMP_b-brl_3 |
| TF | Rep_304_c_55 | Rep_304_c_55_49 | 39980 | 41635 | - | GerE |
| TC | Rep_304_c_55 | Rep_304_c_55_50 | 41749 | 42360 | - | 1.A.16.5.1 |
| peptidase | Rep_304_c_55 | Rep_304_c_55_51 | 42398 | 43045 | - | C40.UPW |
| CAZyme | Rep_304_c_55 | Rep_304_c_55_52 | 43326 | 45692 | - | GH31_15 |
Gene ID: Rep_304_c_55_47
Type: CAZyme
Location: 34985 - 37423 (+)
Type: CAZyme
Location: 34985 - 37423 (+)
Gene ID: Rep_304_c_55_48
Type: pfam
Location: 37508 - 39820 (-)
Type: pfam
Location: 37508 - 39820 (-)
Gene ID: Rep_304_c_55_49
Type: TF
Location: 39980 - 41635 (-)
Type: TF
Location: 39980 - 41635 (-)
Gene ID: Rep_304_c_55_50
Type: TC
Location: 41749 - 42360 (-)
Type: TC
Location: 41749 - 42360 (-)
Gene ID: Rep_304_c_55_51
Type: peptidase
Location: 42398 - 43045 (-)
Type: peptidase
Location: 42398 - 43045 (-)
Gene ID: Rep_304_c_55_52
Type: CAZyme
Location: 43326 - 45692 (-)
Type: CAZyme
Location: 43326 - 45692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.