Cluster: Rep_303_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_303
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_303_c_1 | Rep_303_c_1_113 | 144857 | 146242 | + | 2.A.1.10.2 |
| pfam | Rep_303_c_1 | Rep_303_c_1_114 | 146249 | 146959 | + | Methyltrans_RNA | PUA_4 |
| pfam | Rep_303_c_1 | Rep_303_c_1_115 | 146972 | 147793 | + | DAHP_synth_1 |
| TC | Rep_303_c_1 | Rep_303_c_1_116 | 147794 | 149344 | - | 1.A.23.4.5 |
| pfam | Rep_303_c_1 | Rep_303_c_1_117 | 149827 | 150288 | + | NDK |
| CAZyme | Rep_303_c_1 | Rep_303_c_1_118 | 150321 | 151265 | + | CBM50 |
Gene ID: Rep_303_c_1_113
Type: TC
Location: 144857 - 146242 (+)
Type: TC
Location: 144857 - 146242 (+)
Gene ID: Rep_303_c_1_114
Type: pfam
Location: 146249 - 146959 (+)
Type: pfam
Location: 146249 - 146959 (+)
Gene ID: Rep_303_c_1_115
Type: pfam
Location: 146972 - 147793 (+)
Type: pfam
Location: 146972 - 147793 (+)
Gene ID: Rep_303_c_1_116
Type: TC
Location: 147794 - 149344 (-)
Type: TC
Location: 147794 - 149344 (-)
Gene ID: Rep_303_c_1_117
Type: pfam
Location: 149827 - 150288 (+)
Type: pfam
Location: 149827 - 150288 (+)
Gene ID: Rep_303_c_1_118
Type: CAZyme
Location: 150321 - 151265 (+)
Type: CAZyme
Location: 150321 - 151265 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900321585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.