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Cluster: Rep_303_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_303_c_60 Rep_303_c_60_2 1812 3128 + GT30
STP Rep_303_c_60 Rep_303_c_60_3 3138 3683 + Pribosyltran
pfam Rep_303_c_60 Rep_303_c_60_4 3768 4376 + ADK | AAA_17 | AAA_33
TC Rep_303_c_60 Rep_303_c_60_5 4438 6426 + 1.B.6.1.14
TC Rep_303_c_60 Rep_303_c_60_6 6542 7297 + 3.A.1.3.10
pfam Rep_303_c_60 Rep_303_c_60_7 7294 8580 + SUFBD_core | SufBD_N | SufBD_N
STP Rep_303_c_60 Rep_303_c_60_8 8580 9791 + Aminotran_1_2
TC Rep_303_c_60 Rep_303_c_60_9 9793 10989 + 2.A.23.2.7
Gene ID: Rep_303_c_60_2
Type: CAZyme
Location: 1812 - 3128 (+)
Gene ID: Rep_303_c_60_3
Type: STP
Location: 3138 - 3683 (+)
Gene ID: Rep_303_c_60_4
Type: pfam
Location: 3768 - 4376 (+)
Gene ID: Rep_303_c_60_5
Type: TC
Location: 4438 - 6426 (+)
Gene ID: Rep_303_c_60_6
Type: TC
Location: 6542 - 7297 (+)
Gene ID: Rep_303_c_60_7
Type: pfam
Location: 7294 - 8580 (+)
Gene ID: Rep_303_c_60_8
Type: STP
Location: 8580 - 9791 (+)
Gene ID: Rep_303_c_60_9
Type: TC
Location: 9793 - 10989 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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