Cluster: Rep_303_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_303
- CGC Family ID: CGCFAM_02235
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_303_c_48 | Rep_303_c_48_12 | 10691 | 13147 | - | 8.A.3.1.2 |
| pfam | Rep_303_c_48 | Rep_303_c_48_13 | 13312 | 14154 | - | Poly_export | SLBB | SLBB_2 |
| TC | Rep_303_c_48 | Rep_303_c_48_14 | 14645 | 15766 | - | 9.B.146.1.4 |
| pfam | Rep_303_c_48 | Rep_303_c_48_15 | 15844 | 16395 | - | NusG |
| NULL(UNKNOWN) | Rep_303_c_48 | Rep_303_c_48_16 | 16597 | 16686 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_303_c_48 | Rep_303_c_48_17 | 16989 | 18182 | + | CE1 |
Gene ID: Rep_303_c_48_12
Type: TC
Location: 10691 - 13147 (-)
Type: TC
Location: 10691 - 13147 (-)
Gene ID: Rep_303_c_48_13
Type: pfam
Location: 13312 - 14154 (-)
Type: pfam
Location: 13312 - 14154 (-)
Gene ID: Rep_303_c_48_14
Type: TC
Location: 14645 - 15766 (-)
Type: TC
Location: 14645 - 15766 (-)
Gene ID: Rep_303_c_48_15
Type: pfam
Location: 15844 - 16395 (-)
Type: pfam
Location: 15844 - 16395 (-)
Gene ID: Rep_303_c_48_16
Type:
Location: 16597 - 16686 (-)
Type:
Location: 16597 - 16686 (-)
Gene ID: Rep_303_c_48_17
Type: CAZyme
Location: 16989 - 18182 (+)
Type: CAZyme
Location: 16989 - 18182 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900321585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.