Cluster: Rep_303_CGC34
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_303
- CGC Family ID: CGCFAM_01462
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_303_c_33 | Rep_303_c_33_2 | 1357 | 2298 | + | GT32 |
| CAZyme | Rep_303_c_33 | Rep_303_c_33_3 | 2295 | 3221 | + | GT2 |
| CAZyme | Rep_303_c_33 | Rep_303_c_33_4 | 3223 | 4410 | + | GT4 |
| CAZyme | Rep_303_c_33 | Rep_303_c_33_5 | 4391 | 5563 | + | GT4 |
| NULL(UNKNOWN) | Rep_303_c_33 | Rep_303_c_33_6 | 5831 | 6181 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_303_c_33 | Rep_303_c_33_7 | 6251 | 8557 | + | Pkinase |
| CAZyme | Rep_303_c_33 | Rep_303_c_33_8 | 8652 | 9809 | + | GT4 |
| CAZyme | Rep_303_c_33 | Rep_303_c_33_9 | 9890 | 10678 | + | GT26 |
| pfam | Rep_303_c_33 | Rep_303_c_33_10 | 11250 | 12341 | + | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| TC | Rep_303_c_33 | Rep_303_c_33_11 | 12554 | 13795 | + | 2.A.1.7.5 |
| pfam | Rep_303_c_33 | Rep_303_c_33_12 | 14007 | 15164 | + | CTP_transf_like |
| pfam | Rep_303_c_33 | Rep_303_c_33_13 | 15228 | 16169 | + | Epimerase | GDP_Man_Dehyd |
| CAZyme | Rep_303_c_33 | Rep_303_c_33_14 | 16263 | 18251 | - | GH97 |
Gene ID: Rep_303_c_33_2
Type: CAZyme
Location: 1357 - 2298 (+)
Type: CAZyme
Location: 1357 - 2298 (+)
Gene ID: Rep_303_c_33_3
Type: CAZyme
Location: 2295 - 3221 (+)
Type: CAZyme
Location: 2295 - 3221 (+)
Gene ID: Rep_303_c_33_4
Type: CAZyme
Location: 3223 - 4410 (+)
Type: CAZyme
Location: 3223 - 4410 (+)
Gene ID: Rep_303_c_33_5
Type: CAZyme
Location: 4391 - 5563 (+)
Type: CAZyme
Location: 4391 - 5563 (+)
Gene ID: Rep_303_c_33_6
Type:
Location: 5831 - 6181 (+)
Type:
Location: 5831 - 6181 (+)
Gene ID: Rep_303_c_33_7
Type: STP
Location: 6251 - 8557 (+)
Type: STP
Location: 6251 - 8557 (+)
Gene ID: Rep_303_c_33_8
Type: CAZyme
Location: 8652 - 9809 (+)
Type: CAZyme
Location: 8652 - 9809 (+)
Gene ID: Rep_303_c_33_9
Type: CAZyme
Location: 9890 - 10678 (+)
Type: CAZyme
Location: 9890 - 10678 (+)
Gene ID: Rep_303_c_33_10
Type: pfam
Location: 11250 - 12341 (+)
Type: pfam
Location: 11250 - 12341 (+)
Gene ID: Rep_303_c_33_11
Type: TC
Location: 12554 - 13795 (+)
Type: TC
Location: 12554 - 13795 (+)
Gene ID: Rep_303_c_33_12
Type: pfam
Location: 14007 - 15164 (+)
Type: pfam
Location: 14007 - 15164 (+)
Gene ID: Rep_303_c_33_13
Type: pfam
Location: 15228 - 16169 (+)
Type: pfam
Location: 15228 - 16169 (+)
Gene ID: Rep_303_c_33_14
Type: CAZyme
Location: 16263 - 18251 (-)
Type: CAZyme
Location: 16263 - 18251 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900321585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.