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Cluster: Rep_303_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_303_c_0 Rep_303_c_0_132 173099 174079 + GH73
TC Rep_303_c_0 Rep_303_c_0_133 174081 175388 + 1.I.1.1.3
pfam Rep_303_c_0 Rep_303_c_0_134 175385 177343 + BACON | BACON | BACON | OMP_b-brl_2
NULL(UNKNOWN) Rep_303_c_0 Rep_303_c_0_135 177370 178533 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_303_c_0 Rep_303_c_0_136 178588 180075 + 1.I.1.1.3
NULL(UNKNOWN) Rep_303_c_0 Rep_303_c_0_137 180112 181848 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_303_c_0 Rep_303_c_0_138 181854 182639 + PP2C | PP2C_2
TC Rep_303_c_0 Rep_303_c_0_139 182712 184154 - 2.A.66.2.23
Gene ID: Rep_303_c_0_132
Type: CAZyme
Location: 173099 - 174079 (+)
Gene ID: Rep_303_c_0_133
Type: TC
Location: 174081 - 175388 (+)
Gene ID: Rep_303_c_0_134
Type: pfam
Location: 175385 - 177343 (+)
Gene ID: Rep_303_c_0_135
Type:
Location: 177370 - 178533 (+)
Gene ID: Rep_303_c_0_136
Type: TC
Location: 178588 - 180075 (+)
Gene ID: Rep_303_c_0_137
Type:
Location: 180112 - 181848 (+)
Gene ID: Rep_303_c_0_138
Type: pfam
Location: 181854 - 182639 (+)
Gene ID: Rep_303_c_0_139
Type: TC
Location: 182712 - 184154 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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