Cluster: Rep_303_CGC20
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_303
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_303_c_13 | Rep_303_c_13_11 | 10329 | 12257 | - | CE20 | CE20 |
| CAZyme | Rep_303_c_13 | Rep_303_c_13_12 | 12254 | 14071 | - | GH2 |
| CAZyme | Rep_303_c_13 | Rep_303_c_13_13 | 14091 | 16397 | - | GH31_15 |
| CAZyme | Rep_303_c_13 | Rep_303_c_13_14 | 16428 | 18422 | - | GH97 |
| CAZyme | Rep_303_c_13 | Rep_303_c_13_15 | 18419 | 19405 | - | GH43_17 |
| NULL(UNKNOWN) | Rep_303_c_13 | Rep_303_c_13_16 | 19609 | 20664 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_303_c_13 | Rep_303_c_13_17 | 20675 | 22066 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_303_c_13 | Rep_303_c_13_18 | 22144 | 23601 | - | GH27 |
| NULL(UNKNOWN) | Rep_303_c_13 | Rep_303_c_13_19 | 23755 | 24222 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_303_c_13 | Rep_303_c_13_20 | 24253 | 25980 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_303_c_13 | Rep_303_c_13_21 | 26010 | 29000 | - | 1.B.14.6.1 |
Gene ID: Rep_303_c_13_11
Type: CAZyme
Location: 10329 - 12257 (-)
Type: CAZyme
Location: 10329 - 12257 (-)
Gene ID: Rep_303_c_13_12
Type: CAZyme
Location: 12254 - 14071 (-)
Type: CAZyme
Location: 12254 - 14071 (-)
Gene ID: Rep_303_c_13_13
Type: CAZyme
Location: 14091 - 16397 (-)
Type: CAZyme
Location: 14091 - 16397 (-)
Gene ID: Rep_303_c_13_14
Type: CAZyme
Location: 16428 - 18422 (-)
Type: CAZyme
Location: 16428 - 18422 (-)
Gene ID: Rep_303_c_13_15
Type: CAZyme
Location: 18419 - 19405 (-)
Type: CAZyme
Location: 18419 - 19405 (-)
Gene ID: Rep_303_c_13_16
Type:
Location: 19609 - 20664 (-)
Type:
Location: 19609 - 20664 (-)
Gene ID: Rep_303_c_13_17
Type:
Location: 20675 - 22066 (-)
Type:
Location: 20675 - 22066 (-)
Gene ID: Rep_303_c_13_18
Type: CAZyme
Location: 22144 - 23601 (-)
Type: CAZyme
Location: 22144 - 23601 (-)
Gene ID: Rep_303_c_13_19
Type:
Location: 23755 - 24222 (-)
Type:
Location: 23755 - 24222 (-)
Gene ID: Rep_303_c_13_20
Type: pfam
Location: 24253 - 25980 (-)
Type: pfam
Location: 24253 - 25980 (-)
Gene ID: Rep_303_c_13_21
Type: TC
Location: 26010 - 29000 (-)
Type: TC
Location: 26010 - 29000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900321585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.