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Cluster: Rep_303_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_303_c_0 Rep_303_c_0_49 74999 76690 - 2.A.81.1.2
TC Rep_303_c_0 Rep_303_c_0_50 76721 78406 - 3.A.1.120.6
pfam Rep_303_c_0 Rep_303_c_0_51 78415 78969 - Pep_deformylase
pfam Rep_303_c_0 Rep_303_c_0_52 79124 79378 - Ribosomal_L31
TC Rep_303_c_0 Rep_303_c_0_53 79624 82011 - 3.B.1.1.6
CAZyme Rep_303_c_0 Rep_303_c_0_54 82073 84553 - GT51
pfam Rep_303_c_0 Rep_303_c_0_55 84774 85370 - Flavin_Reduct
pfam Rep_303_c_0 Rep_303_c_0_56 85397 87148 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC Rep_303_c_0 Rep_303_c_0_57 87476 88372 + 3.A.1.115.1
Gene ID: Rep_303_c_0_49
Type: TC
Location: 74999 - 76690 (-)
Gene ID: Rep_303_c_0_50
Type: TC
Location: 76721 - 78406 (-)
Gene ID: Rep_303_c_0_51
Type: pfam
Location: 78415 - 78969 (-)
Gene ID: Rep_303_c_0_52
Type: pfam
Location: 79124 - 79378 (-)
Gene ID: Rep_303_c_0_53
Type: TC
Location: 79624 - 82011 (-)
Gene ID: Rep_303_c_0_54
Type: CAZyme
Location: 82073 - 84553 (-)
Gene ID: Rep_303_c_0_55
Type: pfam
Location: 84774 - 85370 (-)
Gene ID: Rep_303_c_0_56
Type: pfam
Location: 85397 - 87148 (-)
Gene ID: Rep_303_c_0_57
Type: TC
Location: 87476 - 88372 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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