Cluster: Rep_303_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_303
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_303_c_11 | Rep_303_c_11_7 | 12168 | 13577 | + | 2.A.66.1.25 |
| CAZyme | Rep_303_c_11 | Rep_303_c_11_8 | 13675 | 14682 | + | GH5_2 |
| pfam | Rep_303_c_11 | Rep_303_c_11_9 | 14679 | 15158 | + | LuxS |
| CAZyme | Rep_303_c_11 | Rep_303_c_11_10 | 15242 | 16609 | - | CE20 |
| pfam | Rep_303_c_11 | Rep_303_c_11_11 | 16785 | 17873 | + | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | Rep_303_c_11 | Rep_303_c_11_12 | 17942 | 19483 | - | GH51_1 |
Gene ID: Rep_303_c_11_7
Type: TC
Location: 12168 - 13577 (+)
Type: TC
Location: 12168 - 13577 (+)
Gene ID: Rep_303_c_11_8
Type: CAZyme
Location: 13675 - 14682 (+)
Type: CAZyme
Location: 13675 - 14682 (+)
Gene ID: Rep_303_c_11_9
Type: pfam
Location: 14679 - 15158 (+)
Type: pfam
Location: 14679 - 15158 (+)
Gene ID: Rep_303_c_11_10
Type: CAZyme
Location: 15242 - 16609 (-)
Type: CAZyme
Location: 15242 - 16609 (-)
Gene ID: Rep_303_c_11_11
Type: pfam
Location: 16785 - 17873 (+)
Type: pfam
Location: 16785 - 17873 (+)
Gene ID: Rep_303_c_11_12
Type: CAZyme
Location: 17942 - 19483 (-)
Type: CAZyme
Location: 17942 - 19483 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900321585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.