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Cluster: Rep_303_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_303_c_5 Rep_303_c_5_11 14846 16369 + GH43_16
TC Rep_303_c_5 Rep_303_c_5_12 16445 19582 + 1.B.14.6.1
pfam Rep_303_c_5 Rep_303_c_5_13 19594 21177 + SusD_RagB | SusD-like_3
pfam Rep_303_c_5 Rep_303_c_5_14 21462 22934 + SGBP_B_XBD
CAZyme Rep_303_c_5 Rep_303_c_5_15 22947 24479 + GH5_4
CAZyme Rep_303_c_5 Rep_303_c_5_16 24618 26039 + CBM6 | GH43_29
CAZyme Rep_303_c_5 Rep_303_c_5_17 26042 28153 + CBM91 | GH43_10
Gene ID: Rep_303_c_5_11
Type: CAZyme
Location: 14846 - 16369 (+)
Gene ID: Rep_303_c_5_12
Type: TC
Location: 16445 - 19582 (+)
Gene ID: Rep_303_c_5_13
Type: pfam
Location: 19594 - 21177 (+)
Gene ID: Rep_303_c_5_14
Type: pfam
Location: 21462 - 22934 (+)
Gene ID: Rep_303_c_5_15
Type: CAZyme
Location: 22947 - 24479 (+)
Gene ID: Rep_303_c_5_16
Type: CAZyme
Location: 24618 - 26039 (+)
Gene ID: Rep_303_c_5_17
Type: CAZyme
Location: 26042 - 28153 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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