Cluster: Rep_3027_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3027
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3027_c_10 | Rep_3027_c_10_24 | 25022 | 26011 | - | 3.A.1.132.8 |
| pfam | Rep_3027_c_10 | Rep_3027_c_10_25 | 26014 | 27207 | - | NPCBM_assoc | NPCBM_assoc | NPCBM_assoc |
| CAZyme | Rep_3027_c_10 | Rep_3027_c_10_26 | 27626 | 30364 | - | CBM40 | GH33 |
| CAZyme | Rep_3027_c_10 | Rep_3027_c_10_27 | 30531 | 32846 | + | CBM40 | GH33 |
Gene ID: Rep_3027_c_10_24
Type: TC
Location: 25022 - 26011 (-)
Type: TC
Location: 25022 - 26011 (-)
Gene ID: Rep_3027_c_10_25
Type: pfam
Location: 26014 - 27207 (-)
Type: pfam
Location: 26014 - 27207 (-)
Gene ID: Rep_3027_c_10_26
Type: CAZyme
Location: 27626 - 30364 (-)
Type: CAZyme
Location: 27626 - 30364 (-)
Gene ID: Rep_3027_c_10_27
Type: CAZyme
Location: 30531 - 32846 (+)
Type: CAZyme
Location: 30531 - 32846 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.