Cluster: Rep_3027_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3027
- CGC Family ID: CGCFAM_07515
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3027_c_10 | Rep_3027_c_10_1 | 97 | 1119 | - | GH177 |
| pfam | Rep_3027_c_10 | Rep_3027_c_10_2 | 1141 | 2013 | - | AP_endonuc_2 |
| TC | Rep_3027_c_10 | Rep_3027_c_10_3 | 2026 | 2979 | - | 3.A.1.2.13 |
| TC | Rep_3027_c_10 | Rep_3027_c_10_4 | 2969 | 3934 | - | 3.A.1.2.1 |
| TC | Rep_3027_c_10 | Rep_3027_c_10_5 | 3945 | 5441 | - | 3.A.1.2.1 |
| TC | Rep_3027_c_10 | Rep_3027_c_10_6 | 5557 | 6621 | - | 3.A.1.2.11 |
Gene ID: Rep_3027_c_10_1
Type: CAZyme
Location: 97 - 1119 (-)
Type: CAZyme
Location: 97 - 1119 (-)
Gene ID: Rep_3027_c_10_2
Type: pfam
Location: 1141 - 2013 (-)
Type: pfam
Location: 1141 - 2013 (-)
Gene ID: Rep_3027_c_10_3
Type: TC
Location: 2026 - 2979 (-)
Type: TC
Location: 2026 - 2979 (-)
Gene ID: Rep_3027_c_10_4
Type: TC
Location: 2969 - 3934 (-)
Type: TC
Location: 2969 - 3934 (-)
Gene ID: Rep_3027_c_10_5
Type: TC
Location: 3945 - 5441 (-)
Type: TC
Location: 3945 - 5441 (-)
Gene ID: Rep_3027_c_10_6
Type: TC
Location: 5557 - 6621 (-)
Type: TC
Location: 5557 - 6621 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.