Cluster: Rep_3027_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3027
- CGC Family ID: CGCFAM_00939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3027_c_191 | Rep_3027_c_191_1 | 136 | 1089 | + | 3.A.1.1.10 |
| TC | Rep_3027_c_191 | Rep_3027_c_191_2 | 1103 | 2008 | + | 3.A.1.1.29 |
| pfam | Rep_3027_c_191 | Rep_3027_c_191_3 | 2059 | 3666 | + | DUF3502 |
| CAZyme | Rep_3027_c_191 | Rep_3027_c_191_4 | 3726 | 4928 | + | GH109 |
Gene ID: Rep_3027_c_191_1
Type: TC
Location: 136 - 1089 (+)
Type: TC
Location: 136 - 1089 (+)
Gene ID: Rep_3027_c_191_2
Type: TC
Location: 1103 - 2008 (+)
Type: TC
Location: 1103 - 2008 (+)
Gene ID: Rep_3027_c_191_3
Type: pfam
Location: 2059 - 3666 (+)
Type: pfam
Location: 2059 - 3666 (+)
Gene ID: Rep_3027_c_191_4
Type: CAZyme
Location: 3726 - 4928 (+)
Type: CAZyme
Location: 3726 - 4928 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.