Cluster: Rep_3027_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3027
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3027_c_3 | Rep_3027_c_3_13 | 10708 | 11394 | + | 9.B.20.1.4 |
| NULL(UNKNOWN) | Rep_3027_c_3 | Rep_3027_c_3_14 | 11526 | 11870 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3027_c_3 | Rep_3027_c_3_15 | 11865 | 13073 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | Rep_3027_c_3 | Rep_3027_c_3_16 | 13070 | 14275 | - | GT4 |
| CAZyme | Rep_3027_c_3 | Rep_3027_c_3_17 | 14280 | 15476 | - | GT4 |
Gene ID: Rep_3027_c_3_13
Type: TC
Location: 10708 - 11394 (+)
Type: TC
Location: 10708 - 11394 (+)
Gene ID: Rep_3027_c_3_14
Type:
Location: 11526 - 11870 (+)
Type:
Location: 11526 - 11870 (+)
Gene ID: Rep_3027_c_3_15
Type: pfam
Location: 11865 - 13073 (-)
Type: pfam
Location: 11865 - 13073 (-)
Gene ID: Rep_3027_c_3_16
Type: CAZyme
Location: 13070 - 14275 (-)
Type: CAZyme
Location: 13070 - 14275 (-)
Gene ID: Rep_3027_c_3_17
Type: CAZyme
Location: 14280 - 15476 (-)
Type: CAZyme
Location: 14280 - 15476 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.