Cluster: Rep_3027_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3027
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3027_c_178 | Rep_3027_c_178_2 | 301 | 1146 | - | 3.A.1.1.34 |
| TC | Rep_3027_c_178 | Rep_3027_c_178_3 | 1136 | 2029 | - | 3.A.1.1.21 |
| CAZyme | Rep_3027_c_178 | Rep_3027_c_178_4 | 2033 | 4009 | - | GH65 |
| CAZyme | Rep_3027_c_178 | Rep_3027_c_178_5 | 4002 | 5942 | - | GH31_7 |
Gene ID: Rep_3027_c_178_2
Type: TC
Location: 301 - 1146 (-)
Type: TC
Location: 301 - 1146 (-)
Gene ID: Rep_3027_c_178_3
Type: TC
Location: 1136 - 2029 (-)
Type: TC
Location: 1136 - 2029 (-)
Gene ID: Rep_3027_c_178_4
Type: CAZyme
Location: 2033 - 4009 (-)
Type: CAZyme
Location: 2033 - 4009 (-)
Gene ID: Rep_3027_c_178_5
Type: CAZyme
Location: 4002 - 5942 (-)
Type: CAZyme
Location: 4002 - 5942 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.