Cluster: Rep_3027_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3027
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3027_c_150 | Rep_3027_c_150_5 | 2944 | 4728 | + | GH13_39 |
| pfam | Rep_3027_c_150 | Rep_3027_c_150_6 | 4952 | 5488 | - | Hydrolase | PGP_phosphatase | Hydrolase_like | HAD_2 |
| pfam | Rep_3027_c_150 | Rep_3027_c_150_7 | 5481 | 6308 | - | Radical_SAM |
| TC | Rep_3027_c_150 | Rep_3027_c_150_8 | 6312 | 6920 | - | 3.A.1.5.27 |
Gene ID: Rep_3027_c_150_5
Type: CAZyme
Location: 2944 - 4728 (+)
Type: CAZyme
Location: 2944 - 4728 (+)
Gene ID: Rep_3027_c_150_6
Type: pfam
Location: 4952 - 5488 (-)
Type: pfam
Location: 4952 - 5488 (-)
Gene ID: Rep_3027_c_150_7
Type: pfam
Location: 5481 - 6308 (-)
Type: pfam
Location: 5481 - 6308 (-)
Gene ID: Rep_3027_c_150_8
Type: TC
Location: 6312 - 6920 (-)
Type: TC
Location: 6312 - 6920 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.