Cluster: Rep_3027_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3027
- CGC Family ID: CGCFAM_11041
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3027_c_137 | Rep_3027_c_137_1 | 147 | 1322 | + | CE9 |
| pfam | Rep_3027_c_137 | Rep_3027_c_137_2 | 1346 | 2083 | + | Glucosamine_iso |
| pfam | Rep_3027_c_137 | Rep_3027_c_137_3 | 2307 | 4907 | + | PG_binding_1 | PG_binding_1 | PG_binding_1 | PG_binding_1 | PG_binding_1 | PG_binding_1 | SH3_3 | SH3_3 | PG_binding_2 |
| TC | Rep_3027_c_137 | Rep_3027_c_137_4 | 5022 | 5600 | - | 3.A.1.3.10 |
Gene ID: Rep_3027_c_137_1
Type: CAZyme
Location: 147 - 1322 (+)
Type: CAZyme
Location: 147 - 1322 (+)
Gene ID: Rep_3027_c_137_2
Type: pfam
Location: 1346 - 2083 (+)
Type: pfam
Location: 1346 - 2083 (+)
Gene ID: Rep_3027_c_137_3
Type: pfam
Location: 2307 - 4907 (+)
Type: pfam
Location: 2307 - 4907 (+)
Gene ID: Rep_3027_c_137_4
Type: TC
Location: 5022 - 5600 (-)
Type: TC
Location: 5022 - 5600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.