Cluster: Rep_3027_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3027
- CGC Family ID: CGCFAM_08020
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3027_c_29 | Rep_3027_c_29_4 | 6813 | 8636 | - | GH110 |
| TC | Rep_3027_c_29 | Rep_3027_c_29_5 | 8642 | 9985 | - | 3.A.1.1.36 |
| TC | Rep_3027_c_29 | Rep_3027_c_29_6 | 9992 | 10918 | - | 3.A.1.1.36 |
| TC | Rep_3027_c_29 | Rep_3027_c_29_7 | 11194 | 12507 | + | 3.A.1.1.41 |
Gene ID: Rep_3027_c_29_4
Type: CAZyme
Location: 6813 - 8636 (-)
Type: CAZyme
Location: 6813 - 8636 (-)
Gene ID: Rep_3027_c_29_5
Type: TC
Location: 8642 - 9985 (-)
Type: TC
Location: 8642 - 9985 (-)
Gene ID: Rep_3027_c_29_6
Type: TC
Location: 9992 - 10918 (-)
Type: TC
Location: 9992 - 10918 (-)
Gene ID: Rep_3027_c_29_7
Type: TC
Location: 11194 - 12507 (+)
Type: TC
Location: 11194 - 12507 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.