Cluster: Rep_3024_CGC65
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_02174
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_52 | Rep_3024_c_52_4 | 1314 | 2534 | - | 3.B.1.1.5 |
| pfam | Rep_3024_c_52 | Rep_3024_c_52_5 | 2778 | 3269 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | Rep_3024_c_52 | Rep_3024_c_52_6 | 3260 | 4615 | - | MatE | MatE |
| TC | Rep_3024_c_52 | Rep_3024_c_52_7 | 4777 | 6663 | + | 1.A.13.2.3 |
| CAZyme | Rep_3024_c_52 | Rep_3024_c_52_8 | 6773 | 7870 | + | GH179 |
Gene ID: Rep_3024_c_52_4
Type: TC
Location: 1314 - 2534 (-)
Type: TC
Location: 1314 - 2534 (-)
Gene ID: Rep_3024_c_52_5
Type: pfam
Location: 2778 - 3269 (-)
Type: pfam
Location: 2778 - 3269 (-)
Gene ID: Rep_3024_c_52_6
Type: pfam
Location: 3260 - 4615 (-)
Type: pfam
Location: 3260 - 4615 (-)
Gene ID: Rep_3024_c_52_7
Type: TC
Location: 4777 - 6663 (+)
Type: TC
Location: 4777 - 6663 (+)
Gene ID: Rep_3024_c_52_8
Type: CAZyme
Location: 6773 - 7870 (+)
Type: CAZyme
Location: 6773 - 7870 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.