Cluster: Rep_3024_CGC63
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_06990
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_39 | Rep_3024_c_39_17 | 19262 | 20092 | - | 3.A.1.1.45 |
| TC | Rep_3024_c_39 | Rep_3024_c_39_18 | 20092 | 20973 | - | 3.A.1.1.28 |
| STP | Rep_3024_c_39 | Rep_3024_c_39_19 | 21058 | 22350 | - | SBP_bac_1 |
| pfam | Rep_3024_c_39 | Rep_3024_c_39_20 | 22552 | 23340 | - | Lactamase_B |
| CAZyme | Rep_3024_c_39 | Rep_3024_c_39_21 | 23337 | 24413 | - | CE1 |
| CAZyme | Rep_3024_c_39 | Rep_3024_c_39_22 | 24611 | 25801 | - | CE4 |
Gene ID: Rep_3024_c_39_17
Type: TC
Location: 19262 - 20092 (-)
Type: TC
Location: 19262 - 20092 (-)
Gene ID: Rep_3024_c_39_18
Type: TC
Location: 20092 - 20973 (-)
Type: TC
Location: 20092 - 20973 (-)
Gene ID: Rep_3024_c_39_19
Type: STP
Location: 21058 - 22350 (-)
Type: STP
Location: 21058 - 22350 (-)
Gene ID: Rep_3024_c_39_20
Type: pfam
Location: 22552 - 23340 (-)
Type: pfam
Location: 22552 - 23340 (-)
Gene ID: Rep_3024_c_39_21
Type: CAZyme
Location: 23337 - 24413 (-)
Type: CAZyme
Location: 23337 - 24413 (-)
Gene ID: Rep_3024_c_39_22
Type: CAZyme
Location: 24611 - 25801 (-)
Type: CAZyme
Location: 24611 - 25801 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.