Cluster: Rep_3024_CGC57
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_02518
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_31 | Rep_3024_c_31_5 | 5965 | 6912 | + | 3.A.1.1.29 |
| TC | Rep_3024_c_31 | Rep_3024_c_31_6 | 6925 | 7815 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | Rep_3024_c_31 | Rep_3024_c_31_7 | 7861 | 9381 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3024_c_31 | Rep_3024_c_31_8 | 9475 | 10755 | + | GH4 |
Gene ID: Rep_3024_c_31_5
Type: TC
Location: 5965 - 6912 (+)
Type: TC
Location: 5965 - 6912 (+)
Gene ID: Rep_3024_c_31_6
Type: TC
Location: 6925 - 7815 (+)
Type: TC
Location: 6925 - 7815 (+)
Gene ID: Rep_3024_c_31_7
Type:
Location: 7861 - 9381 (+)
Type:
Location: 7861 - 9381 (+)
Gene ID: Rep_3024_c_31_8
Type: CAZyme
Location: 9475 - 10755 (+)
Type: CAZyme
Location: 9475 - 10755 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.