Cluster: Rep_3024_CGC56
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_02720
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_30 | Rep_3024_c_30_40 | 39070 | 39960 | + | 3.A.1.1.4 |
| TC | Rep_3024_c_30 | Rep_3024_c_30_41 | 39975 | 40799 | + | 3.A.1.1.39 |
| CAZyme | Rep_3024_c_30 | Rep_3024_c_30_42 | 40836 | 42128 | + | GH13 |
| CAZyme | Rep_3024_c_30 | Rep_3024_c_30_43 | 42131 | 44524 | + | GH31_15 |
Gene ID: Rep_3024_c_30_40
Type: TC
Location: 39070 - 39960 (+)
Type: TC
Location: 39070 - 39960 (+)
Gene ID: Rep_3024_c_30_41
Type: TC
Location: 39975 - 40799 (+)
Type: TC
Location: 39975 - 40799 (+)
Gene ID: Rep_3024_c_30_42
Type: CAZyme
Location: 40836 - 42128 (+)
Type: CAZyme
Location: 40836 - 42128 (+)
Gene ID: Rep_3024_c_30_43
Type: CAZyme
Location: 42131 - 44524 (+)
Type: CAZyme
Location: 42131 - 44524 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.