Cluster: Rep_3024_CGC55
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_02099
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_28 | Rep_3024_c_28_33 | 43044 | 44555 | + | 3.A.1.2.20 |
| TC | Rep_3024_c_28 | Rep_3024_c_28_34 | 44542 | 45501 | + | 3.A.1.2.13 |
| STP | Rep_3024_c_28 | Rep_3024_c_28_35 | 45560 | 46501 | + | Peripla_BP_1 |
| pfam | Rep_3024_c_28 | Rep_3024_c_28_36 | 46671 | 47555 | + | IU_nuc_hydro |
| CAZyme | Rep_3024_c_28 | Rep_3024_c_28_37 | 47571 | 49970 | + | GH3 |
Gene ID: Rep_3024_c_28_33
Type: TC
Location: 43044 - 44555 (+)
Type: TC
Location: 43044 - 44555 (+)
Gene ID: Rep_3024_c_28_34
Type: TC
Location: 44542 - 45501 (+)
Type: TC
Location: 44542 - 45501 (+)
Gene ID: Rep_3024_c_28_35
Type: STP
Location: 45560 - 46501 (+)
Type: STP
Location: 45560 - 46501 (+)
Gene ID: Rep_3024_c_28_36
Type: pfam
Location: 46671 - 47555 (+)
Type: pfam
Location: 46671 - 47555 (+)
Gene ID: Rep_3024_c_28_37
Type: CAZyme
Location: 47571 - 49970 (+)
Type: CAZyme
Location: 47571 - 49970 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.