Cluster: Rep_3024_CGC52
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_03219
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3024_c_25 | Rep_3024_c_25_40 | 49811 | 50956 | - | GH18 |
| STP | Rep_3024_c_25 | Rep_3024_c_25_41 | 51084 | 51554 | + | NUDIX |
| TF | Rep_3024_c_25 | Rep_3024_c_25_42 | 51594 | 52505 | + | HTH_1 |
| TC | Rep_3024_c_25 | Rep_3024_c_25_43 | 52675 | 54018 | + | 2.A.66.1.33 |
Gene ID: Rep_3024_c_25_40
Type: CAZyme
Location: 49811 - 50956 (-)
Type: CAZyme
Location: 49811 - 50956 (-)
Gene ID: Rep_3024_c_25_41
Type: STP
Location: 51084 - 51554 (+)
Type: STP
Location: 51084 - 51554 (+)
Gene ID: Rep_3024_c_25_42
Type: TF
Location: 51594 - 52505 (+)
Type: TF
Location: 51594 - 52505 (+)
Gene ID: Rep_3024_c_25_43
Type: TC
Location: 52675 - 54018 (+)
Type: TC
Location: 52675 - 54018 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.