Cluster: Rep_3024_CGC51
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_00285
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_25 | Rep_3024_c_25_32 | 38273 | 39208 | + | 3.A.1.1.10 |
| TC | Rep_3024_c_25 | Rep_3024_c_25_33 | 39225 | 40091 | + | 3.A.1.1.29 |
| pfam | Rep_3024_c_25 | Rep_3024_c_25_34 | 40110 | 41069 | + | DUF4838 |
| CAZyme | Rep_3024_c_25 | Rep_3024_c_25_35 | 41187 | 43985 | - | GT51 |
Gene ID: Rep_3024_c_25_32
Type: TC
Location: 38273 - 39208 (+)
Type: TC
Location: 38273 - 39208 (+)
Gene ID: Rep_3024_c_25_33
Type: TC
Location: 39225 - 40091 (+)
Type: TC
Location: 39225 - 40091 (+)
Gene ID: Rep_3024_c_25_34
Type: pfam
Location: 40110 - 41069 (+)
Type: pfam
Location: 40110 - 41069 (+)
Gene ID: Rep_3024_c_25_35
Type: CAZyme
Location: 41187 - 43985 (-)
Type: CAZyme
Location: 41187 - 43985 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.